CDS

Accession Number TCMCG006C27680
gbkey CDS
Protein Id XP_022548960.1
Location join(5790214..5790330,5790457..5790645,5791337..5791587,5791662..5791779,5791860..5791976,5792054..5792200,5792287..5792430,5792522..5792640,5792733..5792790,5792910..5793020,5793120..5793204,5793296..5793393,5793476..5793568,5793661..5793720)
Gene LOC106355795
GeneID 106355795
Organism Brassica napus

Protein

Length 568aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022693239.1
Definition isochorismate synthase 1, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category E
Description isochorismate synthase
KEGG_TC 1.B.8.1
KEGG_Module M00116        [VIEW IN KEGG]
KEGG_Reaction R01717        [VIEW IN KEGG]
KEGG_rclass RC00588        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K02552        [VIEW IN KEGG]
ko:K15040        [VIEW IN KEGG]
EC 5.4.4.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00130        [VIEW IN KEGG]
ko01053        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko04020        [VIEW IN KEGG]
ko04022        [VIEW IN KEGG]
ko04216        [VIEW IN KEGG]
ko04217        [VIEW IN KEGG]
ko04218        [VIEW IN KEGG]
ko04621        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
ko05012        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05166        [VIEW IN KEGG]
map00130        [VIEW IN KEGG]
map01053        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map04020        [VIEW IN KEGG]
map04022        [VIEW IN KEGG]
map04216        [VIEW IN KEGG]
map04217        [VIEW IN KEGG]
map04218        [VIEW IN KEGG]
map04621        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
map05012        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
GOs GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005741        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006575        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0006760        [VIEW IN EMBL-EBI]
GO:0006766        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008483        [VIEW IN EMBL-EBI]
GO:0008909        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009108        [VIEW IN EMBL-EBI]
GO:0009110        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009396        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009627        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009696        [VIEW IN EMBL-EBI]
GO:0009697        [VIEW IN EMBL-EBI]
GO:0009814        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010118        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016769        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0016866        [VIEW IN EMBL-EBI]
GO:0016999        [VIEW IN EMBL-EBI]
GO:0017000        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0018958        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0019867        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031348        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031968        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042180        [VIEW IN EMBL-EBI]
GO:0042181        [VIEW IN EMBL-EBI]
GO:0042372        [VIEW IN EMBL-EBI]
GO:0042374        [VIEW IN EMBL-EBI]
GO:0042398        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0042446        [VIEW IN EMBL-EBI]
GO:0042537        [VIEW IN EMBL-EBI]
GO:0042558        [VIEW IN EMBL-EBI]
GO:0042559        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046189        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046653        [VIEW IN EMBL-EBI]
GO:0046654        [VIEW IN EMBL-EBI]
GO:0046820        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0050486        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072330        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901617        [VIEW IN EMBL-EBI]
GO:1901661        [VIEW IN EMBL-EBI]
GO:1901663        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCTCACTTCATCTTTCTTCTCGGTTTCTGGCCACAAACACTAAAAAACATAGCTCCATCTCCATCTCTCATCATTACTCTCCAACTCCATTCACCGGATTATTCTCCCGCAAGAAGTTTATGTCCTGTTCGATGTCTATGAACGGATGCGAAGGGGATTTCAAGACGCCACTTGGAACAGTGGAGACAAGGACTATGTCCACTGTTTTATCTCCGACAGCCGCCACTGAGAGGCTAATCTCCGCCGTCTCCGAGCTCAAATCTCAACCTCCGCCGTTTTCCTCCGGCGTCGTCCGGTTACAGGTACCAATCGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGCCCAGGACGAGATCCACCCTCGCTGCTTCTTCTCCCGCCGCAGCGACGTCGGTCGTCCCGATCTCCTCCTCGACTTAGCGAGCGACAACGAGAACGCGAACCGAAACGGATCGGATCGTGATCTGGTTAGCGTCGCCGGAATCGGCTCCGCAGTGTTCTTCCGTGACCTTGACGCCTTCTCTCACGATGACTGGAGATCCATCCGAAGGTTTCTATCGCCTAACTCGCCTCTGATTCGCGCCTATGGAGGCATGCGGTTTGATCCTAACGGCAAGATCTCTGTGGAGTGGGAGCCCTTTGGTGCATTTTACTTTTCAGTCCCTCAGGTTGAGTTTAATGAGTTTGGTGGAAGCTCAATGTTGGCTGCTACTCTTGCTTGGGACGATGAACTCTCTTGGACGCTGGAGAATGCTATTGAAGCACTTCAGGAGACTATGCTTCAGGTTTCTTCTGTTGTGGTGAGGTTACGGAGGGAGTCTCTTGGAGTATCTGTGCTTAGCAAGAATCATGTTCCTACAAAAGGGGCGTATTACCCTGCTGTTGAGAAGGCTTTGGAGATTATAAAGCAGAAGAGTTCGTCTCTCAGCAAGGTCGTGCTTGCTCGCAACAGCAGAGTTATAACAGATACCGACATTGATCCCATTGCTTGGCTTGCACAGTTACAGAGTGAAGGGCATGATGCGTATCAGTTCTGTCTTCAACCACCAGGTGCACCAGCTTTTATTGGAAACACGCCTGAGAGACTTTTCCAAAGGAATCAGTTAGGTGTCTGCAGTGAAGCTTTGGCTGCAACTAGGCCTCGAGCTGCTTCAACGGCTCGTGATATGGAGATAGAGCGTGATTTATTAACCAGCCCCAAAGACGACCTTGAGTTCTCTATTGTACGTGAGAATATCAGAGAAAAGCTAAACTCTATATGTGACAAGGTAGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTGCAAGAGTGCAGCACCTGTATTCTCAATTGGCGGGGAGGCTTAGGAGGGAAGATGATGAGTTTGACATCTTGGCTGCTCTGCATCCAACTCCAGCTGTTTGTGGGCTTCCAGCAGAAGAAGCTAGGCTTTTGATTAAGGAAATAGAATCATTCGATAGAGGAATGTACGCTGGACCTGTCGGTTTCTTTGGTGGTGATGAGAGTGAGTTTGCAGTTGGTATCAGATCAGCTCTAGTCGAGAAGGGTCTTGGGGCATTGATCTATGCGGGGACAGGGATTGTAGCTGGAAGCAACCCAACCTCAGAGTGGAATGAGCTTGATCTAAAGATATCTCAGTTCACCAAGTCAATTGAGTCTGAGGCAACAACAACAACAACTCTGCAGCCAATTAATTGA
Protein:  
MASLHLSSRFLATNTKKHSSISISHHYSPTPFTGLFSRKKFMSCSMSMNGCEGDFKTPLGTVETRTMSTVLSPTAATERLISAVSELKSQPPPFSSGVVRLQVPIDQQIGAIDWLQAQDEIHPRCFFSRRSDVGRPDLLLDLASDNENANRNGSDRDLVSVAGIGSAVFFRDLDAFSHDDWRSIRRFLSPNSPLIRAYGGMRFDPNGKISVEWEPFGAFYFSVPQVEFNEFGGSSMLAATLAWDDELSWTLENAIEALQETMLQVSSVVVRLRRESLGVSVLSKNHVPTKGAYYPAVEKALEIIKQKSSSLSKVVLARNSRVITDTDIDPIAWLAQLQSEGHDAYQFCLQPPGAPAFIGNTPERLFQRNQLGVCSEALAATRPRAASTARDMEIERDLLTSPKDDLEFSIVRENIREKLNSICDKVVVKPQKTVRKLARVQHLYSQLAGRLRREDDEFDILAALHPTPAVCGLPAEEARLLIKEIESFDRGMYAGPVGFFGGDESEFAVGIRSALVEKGLGALIYAGTGIVAGSNPTSEWNELDLKISQFTKSIESEATTTTTLQPIN